bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: PRIM2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PRIM2 1 -3.976 2.690 -1.180
PRIM2 1 -3.976 2.690 -1.180 -1.447 -0.482

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PRIM2 Phosphorylation T470 -2.047 _KEPIQPET(ph)PQPKPSVQK_

Background Information for PRIM2:


Pubmed-PRIM2 »
Uniprot-PRIM2 »
Biogrid-PRIM2 »
ProteomicsDB-PRIM2 »

Tumorportal-PRIM2 »
COSMIC-PRIM2 »
GenomeRNAi-PRIM2 »
Genecards-PRIM2


Protein-protein Interactions for PRIM2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait BAG6;BAT3 Cat. description Hein, Mann, Cell 2015
Category members IP bait MAD2L1 Cat. description Hein, Mann, Cell 2015
Category members IP bait DCAF10 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ERP44 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KLHL20 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NLGN4Y Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PM20D2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRIM1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRPS2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAE1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RGS20 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RNF31 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PRIM2
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring PRIM2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PRIM2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Pathway Pathway_320 REACTOME_CELL_CYCLE 0 11.08
Category members Pathway Pathway_319 REACTOME_CHROMOSOME_MAINTENANCE 0 7.37
Category members Pathway Pathway_321 REACTOME_MITOTIC_M_M_G1_PHASES 0 5.47
Category members Pathway Pathway_323 REACTOME_DNA_REPLICATION 0 5.24
Category members Pathway Pathway_317 REACTOME_CELL_CYCLE_MITOTIC 0 4.82
Category members Pathway Pathway_328 REACTOME_TELOMERE_MAINTENANCE 0 3.74
Category members Pathway Pathway_315 REACTOME_S_PHASE 0 2.19
Category members Pathway Pathway_330 REACTOME_SYNTHESIS_OF_DNA 0 1.96
Category members Pathway Pathway_322 REACTOME_G1_S_TRANSITION 0 1.77
Category members Pathway Pathway_313 REACTOME_MITOTIC_G1_G1_S_PHASES 0 1.45
Category members Pathway Pathway_331 REACTOME_M_G1_TRANSITION 0 1.43
Category members Pathway Pathway_329 KEGG_DNA_REPLICATION 0 0.95
Category members Pathway Pathway_327 REACTOME_DNA_STRAND_ELONGATION 0 0.9
Category members Pathway Pathway_332 REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION 0 0.36
Category members Pathway Pathway_324 REACTOME_EXTENSION_OF_TELOMERES 0 0.33
Category members Pathway Pathway_318 REACTOME_ACTIVATION_OF_THE_PRE_REPLICATIVE_COMPLEX 0 0.25
Category members Pathway Pathway_68 KEGG_PURINE_METABOLISM 0 0.23
Category members Pathway Pathway_311 REACTOME_PROCESSIVE_SYNTHESIS_ON_THE_LAGGING_STRAND 0 0.2
Category members Pathway Pathway_277 KEGG_PYRIMIDINE_METABOLISM 0 0.18
Category members Pathway Pathway_316 REACTOME_LAGGING_STRAND_SYNTHESIS 0 0.11
Category members Pathway Pathway_312 REACTOME_INHIBITION_OF_REPLICATION_INITIATION_OF_DAMAGED_DNA_BY_RB1_E2F1 0 0.11
Category members Pathway Pathway_314 REACTOME_POL_SWITCHING 0 0
Category members GO Category GO:0003896 DNA primase activity Database 0
Category members GO Category GO:0006269 DNA replication, synthesis of RNA primer Database 0


.

© Copyright Svejstrup Laboratory 2015