bioLOGIC-db

bioLOGIC Data

Query: POLRMT

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
POLRMT	0	0.991	1.170	-0.470	0.871	-0.027	-0.204	0.279	0.072

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence

ProteomicsDB-POLRMT »

Protein-protein Interactions for POLRMT

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait EIF3E	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait KCTD5	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait LDHD	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait NES	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RPL10	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SET	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait CACNG5	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CLEC11A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait DHX32	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait KCTD17	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait LTBR	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait MRPL12	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait NELL1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait NELL2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait NFKBIA	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PPP6R2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TRIM10	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait VWCE	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in POLRMT

	Domain name	Domain Description	TC-NER relevance -log10(p-value)

Protein complexes (CORUM database) featuring POLRMT

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring POLRMT

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0010467	gene expression	Database	INF
Category members	Pathway	Pathway_348	REACTOME_TRANSCRIPTION	0	9
Category members	Pathway	Pathway_350	REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION	0	7.97
Category members	GO Category	GO:0005739	mitochondrion	Database	1.67
Category members	GO Category	GO:0003677	DNA binding	Database	1.53
Category members	GO Category	GO:0006351	transcription, DNA-templated	Database	1.07
Category members	GO Category	GO:0042645	mitochondrial nucleoid	Database	0.61
Category members	GO Category	GO:0005759	mitochondrial matrix	Database	0.59
Category members	GO Category	GO:0003899	DNA-directed RNA polymerase activity	Database	0.46
Category members	GO Category	GO:0006390	transcription from mitochondrial promoter	Database	0.07
Category members	GO Category	GO:0006391	transcription initiation from mitochondrial promoter	Database	0