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Query: PGD

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PGD 0 2.349 0.730 0.030 0.129 -0.117 0.435

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PGD Ubiquitylation K59 0.785 1.117 _VVGAQSLK(gl)EMVSK_
PGD Ubiquitylation K48 0.157 0.330 _VDDFLANEAK(gl)GTK_
PGD Ubiquitylation K51 -0.548 -0.001 _GTK(gl)VVGAQSLK_

Background Information for PGD:


Pubmed-PGD »
Uniprot-PGD »
Biogrid-PGD »
ProteomicsDB-PGD »

Tumorportal-PGD »
COSMIC-PGD »
GenomeRNAi-PGD »
Genecards-PGD


Protein-protein Interactions for PGD
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait MAGOH;MAGOHB Cat. description Hein, Mann, Cell 2015
Category members IP bait RBM8A Cat. description Hein, Mann, Cell 2015


Protein Domains in PGD
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members 6-PGluconate_DH_C-like IPR008927 0.51
Category members 6PGDH_NADP-bd IPR006115 0.04


Protein complexes (CORUM database) featuring PGD
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PGD
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members Pathway Pathway_34 REACTOME_METABOLISM_OF_CARBOHYDRATES 0 0.31
Category members GO Category GO:0009051 pentose-phosphate shunt, oxidative branch Database 0.17
Category members Pathway Pathway_51 KEGG_PENTOSE_PHOSPHATE_PATHWAY 0 0.11
Category members GO Category GO:0006098 pentose-phosphate shunt Database 0.07
Category members GO Category GO:0005975 carbohydrate metabolic process Database 0.07
Category members GO Category GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity Database 0.04
Category members GO Category GO:0019322 pentose biosynthetic process Database 0.04
Category members Pathway Pathway_27 KEGG_GLUTATHIONE_METABOLISM 0 0
Category members GO Category GO:0050661 NADP binding Database 0
Category members GO Category GO:0055114 oxidation-reduction process Database 0


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