bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: PDZD8

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PDZD8 0 1.723 -0.800 0.750 0.632 1.010

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PDZD8 Phosphorylation S521 -0.443 -0.226 _AQNEFKDEAQSLSHS(ph)PK_
PDZD8 Phosphorylation S538 -0.715 -0.584 _VPTTLSIKPLGAIS(ph)PVLNR_
PDZD8 Phosphorylation S967 -1.580 _LSEPGTDLVEPS(ph)PK_

Background Information for PDZD8:


Pubmed-PDZD8 »
Uniprot-PDZD8 »
Biogrid-PDZD8 »
ProteomicsDB-PDZD8 »

Tumorportal-PDZD8 »
COSMIC-PDZD8 »
GenomeRNAi-PDZD8 »
Genecards-PDZD8


Protein-protein Interactions for PDZD8
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ACCN4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait BTN2A1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C21orf63 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CDH5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CHRND Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CNGA3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ENTPD4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM189B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FSHR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GABRA6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IL17RC Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KCNC4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KCNS3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LRRTM1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NMUR2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHAC2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHB11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHB16 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHB7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHGA5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHGB4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SRPRB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM9B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMPRSS3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TREML2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNRF4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PDZD8
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members PE/DAG-bd IPR002219 0.63
Category members PDZ IPR001478 0.15


Protein complexes (CORUM database) featuring PDZD8
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PDZD8
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0019048 modulation by virus of host morphology or physiology Database 7.81
Category members GO Category GO:0007010 cytoskeleton organization Database 0
Category members GO Category GO:0022604 regulation of cell morphogenesis Database 0
Category members GO Category GO:0035556 intracellular signal transduction Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


.

© Copyright Svejstrup Laboratory 2015