bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: PDYN

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PDYN 0 1.355 0.350 -0.620

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PDYN Phosphorylation S101 0.557 0.798 _LSGS(ph)FLK_

Background Information for PDYN:


Pubmed-PDYN »
Uniprot-PDYN »
Biogrid-PDYN »
ProteomicsDB-PDYN »

Tumorportal-PDYN »
COSMIC-PDYN »
GenomeRNAi-PDYN »
Genecards-PDYN


Protein-protein Interactions for PDYN
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait LCN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PDYN Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in PDYN
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Opioid_neupept IPR006024 0


Protein complexes (CORUM database) featuring PDYN
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PDYN
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005576 extracellular region Database 10.9
Category members Pathway Pathway_1105 REACTOME_GPCR_LIGAND_BINDING 0 2.35
Category members Pathway Pathway_1182 REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS 0 1.69
Category members Pathway Pathway_243 REACTOME_GPCR_DOWNSTREAM_SIGNALING 0 1.27
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members Pathway Pathway_256 REACTOME_SIGNALING_BY_GPCR 0 0.83
Category members Pathway Pathway_1186 REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS 0 0.54
Category members Pathway Pathway_263 REACTOME_G_ALPHA_I_SIGNALLING_EVENTS 0 0.49
Category members GO Category GO:0007218 neuropeptide signaling pathway Database 0.45
Category members Pathway Pathway_260 REACTOME_OPIOID_SIGNALLING 0 0.28
Category members GO Category GO:0007268 synaptic transmission Database 0.23
Category members GO Category GO:0008219 cell death Database 0.08
Category members Pathway Pathway_1100 REACTOME_G_PROTEIN_ACTIVATION 0 0
Category members GO Category GO:0001515 opioid peptide activity Database 0


.

© Copyright Svejstrup Laboratory 2015