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Query: PCDH1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
PCDH1 0 -1.121 1.500 -0.450

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
PCDH1 Phosphorylation S995 -1.121 _SNS(ph)PLPSIQLQPQS(ph)PSASK_
PCDH1 Phosphorylation S984 -1.316 _SNS(ph)PLPSIQLQPQS(ph)PSASK_

Background Information for PCDH1:


Pubmed-PCDH1 »
Uniprot-PCDH1 »
Biogrid-PCDH1 »
ProteomicsDB-PCDH1 »

Tumorportal-PCDH1 »
COSMIC-PCDH1 »
GenomeRNAi-PCDH1 »
Genecards-PCDH1


Protein-protein Interactions for PCDH1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait PCDH1 Cat. description Hein, Mann, Cell 2015


Protein Domains in PCDH1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Cadherin IPR002126 0.32
Category members Cadherin-like IPR015919 0.21
Category members Cadherin_N IPR013164 0.08
Category members Protocadherin IPR013585 0


Protein complexes (CORUM database) featuring PCDH1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring PCDH1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005887 integral to plasma membrane Database 1.69
Category members GO Category GO:0005911 cell-cell junction Database 1.4
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0007267 cell-cell signaling Database 0.94
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0007156 homophilic cell adhesion Database 0.28
Category members GO Category GO:0005509 calcium ion binding Database 0.11
Category members GO Category GO:0007399 nervous system development Database 0


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