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bioLOGIC Data

Query: PCBP3

RNAi screen result	RNAPII IP (PI)	CSB IP	CSB IP (PI)	Chrom.	Chrom. (PI)	Phosphorylation	Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
PCBP3	0	-0.287	-0.060	-0.510	-0.835	-0.602	-0.993	-0.725	-0.337

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
PCBP3	Ubiquitylation	K44	0.838	0.772	_EVGSIIGKK(gl)_
PCBP3	Ubiquitylation	K330	-0.123	0.488	_QM(ox)SGAQIK(gl)IANPVEGSTDR_
PCBP3	Ubiquitylation	K317	0.274	0.191	_QGAK(gl)INEIR_
PCBP3	Ubiquitylation	K43		-0.219	_EVGSIIGK(gl)KGESVK_
PCBP3	Ubiquitylation	K127	-0.025	-0.311	_LVVPASQCGSLIGK(gl)GGCK_
PCBP3	Ubiquitylation	K35	0.116		_LLMHGK(gl)EVGSIIGK_

Background Information for PCBP3:

Pubmed-PCBP3 »

Uniprot-PCBP3 »

Biogrid-PCBP3 »

ProteomicsDB-PCBP3 »

Tumorportal-PCBP3 »

COSMIC-PCBP3 »

GenomeRNAi-PCBP3 »

Genecards-PCBP3

Protein-protein Interactions for PCBP3

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait AKR1B10	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait BBOX1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait C12orf26	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait CCDC6	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait DCP2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait DLD	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait DVL3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait GBP2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait GLT25D2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait HDAC10	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait KCTD17	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait KIAA1949	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait OCRL	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait PDCD2L	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RHOD	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TSTA3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait TYW3	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait WNT16	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in PCBP3

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	KH_dom_type_2	IPR004044	0.34
Category members	KH_dom	IPR004087	0.23
Category members	KH_dom_type_1	IPR004088	0.13

Protein complexes (CORUM database) featuring PCBP3

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring PCBP3

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0003723	RNA binding	Database	INF
Category members	GO Category	GO:0005634	nucleus	Database	INF
Category members	GO Category	GO:0005829	cytosol	Database	INF
Category members	GO Category	GO:0016071	mRNA metabolic process	Database	INF
Category members	GO Category	GO:0030529	ribonucleoprotein complex	Database	8.45
Category members	DDR Literature	pubmedid:19647519	Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation		3.6
Category members	GO Category	GO:0005739	mitochondrion	Database	1.67
Category members	GO Category	GO:0003677	DNA binding	Database	1.53
Category members	GO Category	GO:0043231	intracellular membrane-bounded organelle	Database	0.43