bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: NUDT1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
NUDT1 0 0.113 1.010 -0.630

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
NUDT1 Ubiquitylation K64 0.491 _VLLGMK(gl)K_
NUDT1 Ubiquitylation K65 -0.378 0.491 _VLLGMKK(gl)_

Background Information for NUDT1:


Pubmed-NUDT1 »
Uniprot-NUDT1 »
Biogrid-NUDT1 »
ProteomicsDB-NUDT1 »

Tumorportal-NUDT1 »
COSMIC-NUDT1 »
GenomeRNAi-NUDT1 »
Genecards-NUDT1


Protein-protein Interactions for NUDT1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait NUDT1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in NUDT1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members NUDIX_hydrolase_dom IPR000086 0
Category members NUDIX_hydrolase_dom-like IPR015797 0
Category members Nudix_hydrolase IPR020476 0


Protein complexes (CORUM database) featuring NUDT1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring NUDT1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0006281 DNA repair Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0006200 ATP catabolic process Database 2.13
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0005759 mitochondrial matrix Database 0.59
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0006298 mismatch repair Database 0.33
Category members GO Category GO:0006184 GTP catabolic process Database 0.29
Category members GO Category GO:0016787 hydrolase activity Database 0.22
Category members GO Category GO:0003924 GTPase activity Database 0.16
Category members GO Category GO:0030515 snoRNA binding Database 0.07
Category members GO Category GO:0006195 purine nucleotide catabolic process Database 0
Category members GO Category GO:0006203 dGTP catabolic process Database 0
Category members GO Category GO:0006979 response to oxidative stress Database 0
Category members GO Category GO:0008413 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity Database 0
Category members GO Category GO:0034656 nucleobase-containing small molecule catabolic process Database 0
Category members GO Category GO:0035539 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity Database 0
Category members GO Category GO:0042262 DNA protection Database 0
Category members GO Category GO:0046061 dATP catabolic process Database 0
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0055086 nucleobase-containing small molecule metabolic process Database 0


.

© Copyright Svejstrup Laboratory 2015