bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: NHS

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
NHS 0 -0.680 0.290 -0.270

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
NHS Phosphorylation T998 -0.362 -0.318 _ATT(ph)PSLPSVDNEFK_
NHS Phosphorylation T997 -0.586 -0.326 _AT(ph)TPSLPSVDNEFK_

Background Information for NHS:


Pubmed-NHS »
Uniprot-NHS »
Biogrid-NHS »
ProteomicsDB-NHS »

Tumorportal-NHS »
COSMIC-NHS »
GenomeRNAi-NHS »
Genecards-NHS


Protein-protein Interactions for NHS
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ABI1 Cat. description Hein, Mann, Cell 2015
Category members IP bait BAG6;BAT3 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPD Cat. description Hein, Mann, Cell 2015
Category members IP bait KIF5B Cat. description Hein, Mann, Cell 2015
Category members IP bait KIFC3 Cat. description Hein, Mann, Cell 2015
Category members IP bait MLF1IP Cat. description Hein, Mann, Cell 2015
Category members IP bait MLLT1 Cat. description Hein, Mann, Cell 2015
Category members IP bait OTUD5 Cat. description Hein, Mann, Cell 2015
Category members IP bait SESN2 Cat. description Hein, Mann, Cell 2015
Category members IP bait SGTB Cat. description Hein, Mann, Cell 2015
Category members IP bait SORT1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SYNCRIP Cat. description Hein, Mann, Cell 2015
Category members IP bait TUBG1 Cat. description Hein, Mann, Cell 2015
Category members IP bait USP43 Cat. description Hein, Mann, Cell 2015
Category members IP bait YWHAH Cat. description Hein, Mann, Cell 2015


Protein Domains in NHS
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring NHS
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring NHS
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0030027 lamellipodium Database 1.77
Category members GO Category GO:0005923 tight junction Database 0.69
Category members GO Category GO:0005925 focal adhesion Database 0.68
Category members GO Category GO:0030154 cell differentiation Database 0.06
Category members Disease phenotype Nuclear_cataract Nuclear cataract Database 0
Category members Disease phenotype Total_congenital_cataract Total congenital cataract Database 0
Category members GO Category GO:0002088 lens development in camera-type eye Database 0
Category members GO Category GO:0016324 apical plasma membrane Database 0


.

© Copyright Svejstrup Laboratory 2015