bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: NELFB

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
NELFB 0 -8.735 -0.981 -3.214 -1.046 -0.847

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
NELFB Ubiquitylation K146 -0.603 _ACAVEVK(gl)R_
NELFB Ubiquitylation K519 -1.238 _VAPSK(gl)LEALQK_
NELFB Ubiquitylation K85 0.958 -1.303 _VSAIASEGK(gl)AEER_
NELFB Phosphorylation S557 -2.020 -1.963 _KPS(ph)PAQAAETPALELPLPSVPAPAPL_

Background Information for NELFB:


Pubmed-NELFB »
Uniprot-NELFB »
Biogrid-NELFB »
ProteomicsDB-NELFB »

Tumorportal-NELFB »
COSMIC-NELFB »
GenomeRNAi-NELFB »
Genecards-NELFB


Protein-protein Interactions for NELFB
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in NELFB
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring NELFB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 2598 NELF complex (Negative elongation factor complex) Database 0.47
Category members Corum 281 NELF complex (Negative elongation factor complex) Database 0.47


Categories featuring NELFB
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0010467 gene expression Database INF
Category members GO Category GO:0016032 viral process Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0050434 positive regulation of viral transcription Database 4.8
Category members GO Category GO:0006368 transcription elongation from RNA polymerase II promoter Database 2.03
Category members GO Category GO:0045892 negative regulation of transcription, DNA-dependent Database 1.15
Category members GO Category GO:0006366 transcription from RNA polymerase II promoter Database 0.96
Category members GO Category GO:0032021 NELF complex Database 0.47


.

© Copyright Svejstrup Laboratory 2015