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Query: LSG1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LSG1 0 -0.216 -0.240 -0.240 -0.441 -0.373

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LSG1 Phosphorylation S271 0.838 _FGHS(ph)SFDQAEISHSESEHLPAR_
LSG1 Phosphorylation S272 0.838 _FGHS(ph)SFDQAEISHSESEHLPAR_

Background Information for LSG1:


Pubmed-LSG1 »
Uniprot-LSG1 »
Biogrid-LSG1 »
ProteomicsDB-LSG1 »

Tumorportal-LSG1 »
COSMIC-LSG1 »
GenomeRNAi-LSG1 »
Genecards-LSG1


Protein-protein Interactions for LSG1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait EIF3E Cat. description Hein, Mann, Cell 2015
Category members IP bait EMC3 Cat. description Hein, Mann, Cell 2015
Category members IP bait NOP56 Cat. description Hein, Mann, Cell 2015
Category members IP bait PRKCI Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL10 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL35 Cat. description Hein, Mann, Cell 2015
Category members IP bait VAPA Cat. description Hein, Mann, Cell 2015
Category members IP bait FGL1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LPPR1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TTC29 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VAPA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VAPB Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LSG1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members GTP_binding_domain IPR006073 0.59


Protein complexes (CORUM database) featuring LSG1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LSG1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0005783 endoplasmic reticulum Database 0.62
Category members GO Category GO:0042254 ribosome biogenesis Database 0.29
Category members GO Category GO:0006184 GTP catabolic process Database 0.29
Category members GO Category GO:0005525 GTP binding Database 0.16
Category members GO Category GO:0003924 GTPase activity Database 0.16
Category members GO Category GO:0015030 Cajal body Database 0.04
Category members GO Category GO:0051168 nuclear export Database 0


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