bioLOGIC-db

bioLOGIC Data

Query: LPGAT1

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
LPGAT1	0	0.991	-0.960	0.920				-0.396	0.147

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
LPGAT1	Ubiquitylation	K165		0.320	_SYRDQQLLLLKK(gl)_

ProteomicsDB-LPGAT1 »

Protein-protein Interactions for LPGAT1

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait ATL3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait BMPR1A	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait CHST15	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait HAX1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait MBOAT1	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RNF41	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait RPL35	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait TUBA1C	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait VAPA	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait IZUMO1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait LPGAT1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait LYPD6	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in LPGAT1

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	Plipid/glycerol_acylTrfase	IPR002123	0.17

Protein complexes (CORUM database) featuring LPGAT1

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring LPGAT1

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005737	cytoplasm	Database	12.81
Category members	GO Category	GO:0016021	integral to membrane	Database	7.67
Category members	GO Category	GO:0005789	endoplasmic reticulum membrane	Database	1.57
Category members	GO Category	GO:0044281	small molecule metabolic process	Database	0.35
Category members	GO Category	GO:0016746	transferase activity, transferring acyl groups	Database	0.17
Category members	GO Category	GO:0003674	molecular_function	Database	0.08
Category members	Pathway	Pathway_714	REACTOME_ACYL_CHAIN_REMODELLING_OF_PG	0	0.07
Category members	GO Category	GO:0036148	phosphatidylglycerol acyl-chain remodeling	Database	0.07
Category members	Pathway	Pathway_100	REACTOME_PHOSPHOLIPID_METABOLISM	0	0
Category members	Pathway	Pathway_161	REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS	0	0
Category members	Pathway	Pathway_276	KEGG_GLYCEROPHOSPHOLIPID_METABOLISM	0	0
Category members	Pathway	Pathway_4	REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS	0	0
Category members	GO Category	GO:0006644	phospholipid metabolic process	Database	0
Category members	GO Category	GO:0008150	biological_process	Database	0
Category members	GO Category	GO:0008152	metabolic process	Database	0
Category members	GO Category	GO:0046474	glycerophospholipid biosynthetic process	Database	0