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Query: LCMT2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
LCMT2 0 -0.170 -1.220 1.190

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
LCMT2 Ubiquitylation K24 -0.365 -0.995 _RAGAVQNTNDSSALSK(gl)R_
LCMT2 Ubiquitylation K356 -2.533 -2.594 _VNPASPSGVFPASVVSSEGQVPNLK(gl)R_

Background Information for LCMT2:


Pubmed-LCMT2 »
Uniprot-LCMT2 »
Biogrid-LCMT2 »
ProteomicsDB-LCMT2 »

Tumorportal-LCMT2 »
COSMIC-LCMT2 »
GenomeRNAi-LCMT2 »
Genecards-LCMT2


Protein-protein Interactions for LCMT2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait AP4M1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CTNNBL1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SNCA Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS26A Cat. description Hein, Mann, Cell 2015
Category members IP bait FGL1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IMPDH1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LCMT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TKT Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in LCMT2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members SAM-dependent_MTases-like IPR029063 0.04
Category members LCM_MeTrfase IPR007213 0


Protein complexes (CORUM database) featuring LCMT2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring LCMT2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0008033 tRNA processing Database 0.39
Category members Pathway Pathway_137 KEGG_HISTIDINE_METABOLISM 0 0
Category members Pathway Pathway_154 KEGG_TYROSINE_METABOLISM 0 0
Category members Pathway Pathway_299 KEGG_SELENOAMINO_ACID_METABOLISM 0 0
Category members GO Category GO:0008168 methyltransferase activity Database 0
Category members GO Category GO:0032259 methylation Database 0


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