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Query: KDM3B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
KDM3B 0 -1.086 0.646 -1.094

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
KDM3B Ubiquitylation K580 -1.565 0.147 _SVLGTDTK(gl)PGSK_
KDM3B Ubiquitylation K11 -0.645 _(ac)ADAAASPVGK(gl)R_
KDM3B Ubiquitylation K570 -1.152 _QSLESLSSGLCK(gl)GR_
KDM3B Ubiquitylation K584 -0.786 _SVLGTDTKPGSK(gl)AGSSVDR_

Background Information for KDM3B:


Pubmed-KDM3B »
Uniprot-KDM3B »
Biogrid-KDM3B »
ProteomicsDB-KDM3B »

Tumorportal-KDM3B »
COSMIC-KDM3B »
GenomeRNAi-KDM3B »
Genecards-KDM3B


Protein-protein Interactions for KDM3B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait AK1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CHMP4B Cat. description Hein, Mann, Cell 2015
Category members IP bait KDM3B Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH9 Cat. description Hein, Mann, Cell 2015
Category members IP bait ALOX5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CPN1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MRPL38 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PLOD1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RFPL4B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SERPINB2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SMYD3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TH Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRIM11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in KDM3B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members JmjC_dom IPR003347 0


Protein complexes (CORUM database) featuring KDM3B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring KDM3B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0016568 chromatin modification Database 0.18
Category members GO Category GO:0051213 dioxygenase activity Database 0.08
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


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