bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: HIST1H1D

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
HIST1H1D 2 -1.220 1.110 -0.790
HIST1H1D 2 -1.220 1.110 -0.790 -2.077 -1.246 -0.337 -1.149 -1.118

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
HIST1H1D Ubiquitylation K97 0.052 3.473 _GTLVQTK(gl)GTGASGSFK_
HIST1H1D Ubiquitylation K75 1.615 2.152 _KALAAAGYDVEK(gl)NNSR_
HIST1H1D Ubiquitylation K85 1.137 1.765 _LGLK(gl)SLVSK_
HIST1H1D Ubiquitylation K34 1.125 1.574 _K(gl)ASGPPVSELITK_
HIST1H1D Ubiquitylation K64 1.076 1.046 _K(gl)ALAAAGYDVEKNNSR_
HIST1H1D Ubiquitylation K90 -0.158 0.945 _SLVSK(gl)GTLVQTK_
HIST1H1D Ubiquitylation K106 0.973 0.893 _GTGASGSFK(gl)LNKK_
HIST1H1D Ubiquitylation K46 0.238 0.432 _KASGPPVSELITK(gl)AVAASK_
HIST1H1D Phosphorylation S36 -0.319 _RKAS(ph)GPPVSELITK_
HIST1H1D Phosphorylation T4 -1.741 -0.745 _(ac)SET(ph)APAAPAAPAPAEK_
HIST1H1D Phosphorylation S2 -1.463 -1.064 _(ac)S(ph)ETAPLAPTIPAPAEK_
HIST1H1D Phosphorylation T4 -1.525 -1.166 _(ac)SET(ph)APLAPTIPAPAEK_
HIST1H1D Phosphorylation S2 -1.308 -1.220 _S(ph)ETAPAAPAAPAPAEK_
HIST1H1D Phosphorylation T18 -2.157 -1.761 _(ac)SETAPLAPTIPAPAEKT(ph)PVKK_
HIST1H1D Phosphorylation T18 -2.773 -1.986 _(ac)S(ph)ETAPAAPAAPAPAEKT(ph)PVKK_
HIST1H1D Ubiquitylation K63 -0.481 _SGVSLAALK(gl)K_

Background Information for HIST1H1D:





Protein-protein Interactions for HIST1H1D

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait AGPAT2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait BBS7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CCNB1IP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HDHD2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HOXB5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PMS1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PPA2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAGE Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RPL28 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait USP38 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZC3HAV1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF662 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in HIST1H1D

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Histone_H1/H5_H15 IPR005818 0.14
Category members Histone_H5 IPR005819 0.08


Protein complexes (CORUM database) featuring HIST1H1D

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 3055 Nop56p-associated pre-rRNA complex Database INF


Categories featuring HIST1H1D

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0006334 nucleosome assembly Database 3.77
Category members Pathway Pathway_876 REACTOME_APOPTOTIC_EXECUTION_PHASE 0 2.5
Category members GO Category GO:0000786 nucleosome Database 2.41
Category members Pathway Pathway_837 REACTOME_APOPTOSIS 0 2.39
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members Pathway Pathway_955 REACTOME_APOPTOSIS_INDUCED_DNA_FRAGMENTATION 0 0.51
Category members GO Category GO:0000790 nuclear chromatin Database 0.46
Category members GO Category GO:0016584 nucleosome positioning Database 0


© Copyright Svejstrup Laboratory 2015