bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: HIST1H1B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
HIST1H1B 1 1.203 -0.080 0.290
HIST1H1B 1 1.203 -0.080 0.290 -3.698

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
HIST1H1B Ubiquitylation K97 0.052 3.473 _GTLVQTK(gl)GTGASGSFK_
HIST1H1B Ubiquitylation K85 1.137 1.765 _LGLK(gl)SLVSK_
HIST1H1B Ubiquitylation K90 -0.158 0.945 _SLVSK(gl)GTLVQTK_
HIST1H1B Ubiquitylation K106 0.973 0.893 _GTGASGSFK(gl)LNKK_

Background Information for HIST1H1B:





Protein-protein Interactions for HIST1H1B

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CBX8 Cat. description Hein, Mann, Cell 2015
Category members IP bait EIF3A Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPU Cat. description Hein, Mann, Cell 2015
Category members IP bait KTN1 Cat. description Hein, Mann, Cell 2015
Category members IP bait NLRP3 Cat. description Hein, Mann, Cell 2015
Category members IP bait NPM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL10 Cat. description Hein, Mann, Cell 2015
Category members IP bait TM9SF4 Cat. description Hein, Mann, Cell 2015
Category members IP bait B3GALNT1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DDX19B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DGUOK Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GPBP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HAX1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HSPA8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MAPK9 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NUFIP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SYT16 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZSCAN20 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in HIST1H1B

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Histone_H1/H5_H15 IPR005818 0.14
Category members Histone_H5 IPR005819 0.08


Protein complexes (CORUM database) featuring HIST1H1B

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring HIST1H1B

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0006334 nucleosome assembly Database 3.77
Category members DDR Literature pubmedid:19647519 Paulsen et al., 2009 siRNA screen for g-H2A.x phosphorylation 3.6
Category members Pathway Pathway_876 REACTOME_APOPTOTIC_EXECUTION_PHASE 0 2.5
Category members GO Category GO:0000786 nucleosome Database 2.41
Category members Pathway Pathway_837 REACTOME_APOPTOSIS 0 2.39
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members Pathway Pathway_955 REACTOME_APOPTOSIS_INDUCED_DNA_FRAGMENTATION 0 0.51
Category members GO Category GO:0000790 nuclear chromatin Database 0.46


© Copyright Svejstrup Laboratory 2015