bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: HBA1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
HBA1 0 0.000 0.650 -0.920
HBA1 0 0.000 1.470 -0.850

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for HBA1:





Protein-protein Interactions for HBA1

Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in HBA1

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Globin IPR000971 0.14
Category members Globin-like IPR009050 0.08
Category members Haemoglobin_a IPR002338 0
Category members Haemoglobin_pi IPR002339 0


Protein complexes (CORUM database) featuring HBA1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring HBA1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members DDR Literature pubmedid:TBD2_UV_increased Elia et al, 2015 UV increased acetylation events Elia et al. INF
Category members GO Category GO:0005576 extracellular region Database 10.9
Category members GO Category GO:0022627 cytosolic small ribosomal subunit Database 9.14
Category members GO Category GO:0010942 positive regulation of cell death Database 0.82
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members GO Category GO:0042542 response to hydrogen peroxide Database 0.19
Category members GO Category GO:0005344 oxygen transporter activity Database 0.19
Category members GO Category GO:0019825 oxygen binding Database 0.14
Category members GO Category GO:0005506 iron ion binding Database 0.04
Category members GO Category GO:0020037 heme binding Database 0.04
Category members GO Category GO:0015671 oxygen transport Database 0.01
Category members Pathway Pathway_403 BIOCARTA_AHSP_PATHWAY 0 0
Category members Disease phenotype Autosomal_dominant_methemoglobinemia Autosomal dominant methemoglobinemia Database 0
Category members Disease phenotype HEINZ_BODY_ANEMIAS HEINZ BODY ANEMIAS Database 0
Category members GO Category GO:0004601 peroxidase activity Database 0
Category members GO Category GO:0005833 hemoglobin complex Database 0
Category members GO Category GO:0015701 bicarbonate transport Database 0
Category members GO Category GO:0031720 haptoglobin binding Database 0
Category members GO Category GO:0031838 haptoglobin-hemoglobin complex Database 0
Category members GO Category GO:0042744 hydrogen peroxide catabolic process Database 0
Category members GO Category GO:0051291 protein heterooligomerization Database 0


© Copyright Svejstrup Laboratory 2015