bioLOGIC-db

bioLOGIC Data

Query: GDI2

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
GDI2	0	-3.340	-0.180	-0.020	-0.675	-0.337	-0.291	0.493	-1.831

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
GDI2	Ubiquitylation	K439	0.483	0.420	_MTGSEFDFEEMK(gl)R_
GDI2	Ubiquitylation	K273	-0.488	0.081	_VIGVK(gl)SEGEIAR_
GDI2	Ubiquitylation	K214	0.003	0.067	_IK(gl)LYSESLAR_
GDI2	Ubiquitylation	K58	-0.561	-0.548	_NPYYGGESASITPLEDLYK(gl)R_
GDI2	Phosphorylation	S65	-0.852	-0.729	_IPGS(ph)PPESMGR_

Pubmed-GDI2 »

ProteomicsDB-GDI2 »

COSMIC-GDI2 »

Genecards-GDI2

Protein-protein Interactions for GDI2

Show screen data for	Category Name and Description	Link to cat description	Data Source
Category members	IP bait RAB5C	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SKA3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait SMAD3	Cat. description	Hein, Mann, Cell 2015
Category members	IP bait GDI1	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait GDI2	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RAB1A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RAB1B	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RAB31	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RAB3A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RAB5A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RAB5C	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RAB6B	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RAB8B	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015
Category members	IP bait RAB9A	Cat. description	BioPlex, Huttlin, Gygi, Cell 2015

Protein Domains in GDI2

	Domain name	Domain Description	TC-NER relevance -log10(p-value)
Category members	RabGDI	IPR000806	0
Category members	GDP_dissociation_inhibitor	IPR018203	0

Protein complexes (CORUM database) featuring GDI2

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring GDI2

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	GO Category	GO:0005515	protein binding	Database	INF
Category members	GO Category	GO:0005829	cytosol	Database	INF
Category members	GO Category	GO:0005737	cytoplasm	Database	12.81
Category members	GO Category	GO:0015031	protein transport	Database	3.48
Category members	GO Category	GO:0016020	membrane	Database	0.52
Category members	GO Category	GO:0007264	small GTPase mediated signal transduction	Database	0.37
Category members	Pathway	Pathway_838	SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES	0	0.35
Category members	GO Category	GO:0005097	Rab GTPase activator activity	Database	0.3
Category members	Pathway	Pathway_510	SIG_CHEMOTAXIS	0	0.28
Category members	GO Category	GO:0005794	Golgi apparatus	Database	0.27
Category members	GO Category	GO:0051056	regulation of small GTPase mediated signal transduction	Database	0.25
Category members	GO Category	GO:0032851	positive regulation of Rab GTPase activity	Database	0.21
Category members	Pathway	Pathway_519	REACTOME_SIGNALING_BY_RHO_GTPASES	0	0
Category members	GO Category	GO:0005093	Rab GDP-dissociation inhibitor activity	Database	0
Category members	GO Category	GO:0007165	signal transduction	Database	0