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Query: GATAD2B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
GATAD2B 3 3.700 -0.530 -0.230 -0.147 0.600
GATAD2B 3 3.700 -0.530 -0.230 -1.157 -0.789 -0.828

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
GATAD2B Phosphorylation T120 -1.102 1.781 _GRLT(ph)PS(ph)PDIIVLSDNEASSPR_
GATAD2B Phosphorylation S338 1.596 0.866 _VSSPLPS(ph)PSAMTDAANSQAAAK_
GATAD2B Phosphorylation S486 1.427 0.618 _LQQQAALS(ph)PTTAPAVSSVSK_
GATAD2B Phosphorylation S135 -0.258 0.162 _GRLTPS(ph)PDIIVLSDNEASS(ph)PR_
GATAD2B Phosphorylation S134 -0.320 _LTPS(ph)PDIIVLSDNEAS(ph)SPR_
GATAD2B Phosphorylation S122 -0.663 -0.537 _GRLT(ph)PS(ph)PDIIVLSDNEASSPR_
GATAD2B Phosphorylation S129 -1.356 -0.779 _LTPSPDIIVLS(ph)DNEASSPR_
GATAD2B Phosphorylation S334 -0.045 -1.702 _VSS(ph)PLPSPSAMTDAANSQAAAK_
GATAD2B Phosphorylation S333 -0.139 _VS(ph)SPLPSPSAMTDAANSQAAAK_
GATAD2B Ubiquitylation K30 2.874 _SLDPADERDDVLAK(gl)R_
GATAD2B Ubiquitylation K467 0.219 _NAFVK(gl)ALQQEQEIEQR_

Background Information for GATAD2B:


Pubmed-GATAD2B »
Uniprot-GATAD2B »
Biogrid-GATAD2B »
ProteomicsDB-GATAD2B »

Tumorportal-GATAD2B »
COSMIC-GATAD2B »
GenomeRNAi-GATAD2B »
Genecards-GATAD2B


Protein-protein Interactions for GATAD2B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CDK2AP1 Cat. description Hein, Mann, Cell 2015
Category members IP bait HDAC1 Cat. description Hein, Mann, Cell 2015
Category members IP bait HMG20A Cat. description Hein, Mann, Cell 2015
Category members IP bait KPNA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MBD2 Cat. description Hein, Mann, Cell 2015
Category members IP bait MTA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MTA2 Cat. description Hein, Mann, Cell 2015
Category members IP bait TCF20 Cat. description Hein, Mann, Cell 2015
Category members IP bait WDR5 Cat. description Hein, Mann, Cell 2015
Category members IP bait ZMYND8 Cat. description Hein, Mann, Cell 2015
Category members IP bait C9orf25 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CDC16 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CPNE5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CROT Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GATAD2B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IKZF1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IKZF3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait L3MBTL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MAGEE1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MBD3L1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NCAPH2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PHF20L1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PSME3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait QPRT Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TCF19 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TXNIP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZBED1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZBTB46 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF219 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in GATAD2B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Znf_GATA IPR000679 0.29


Protein complexes (CORUM database) featuring GATAD2B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 778 LARC complex (LCR-associated remodeling complex) Database 5.04
Category members Corum 659 MeCP1 complex Database 4.17
Category members Corum 685 MeCP1 complex Database 4.17
Category members Corum 649 HDAC1-associated core complex cII Database 3.34
Category members Corum 650 HDAC2-asscociated core complex Database 2.26


Categories featuring GATAD2B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0016607 nuclear speck Database 4.84
Category members Pathway Pathway_943 PID_HDAC_CLASSI_PATHWAY 0 1.08
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0003700 sequence-specific DNA binding transcription factor activity Database 0.63
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0043565 sequence-specific DNA binding Database 0.18
Category members Disease phenotype Nonspecific_severe_ID Nonspecific severe ID Database 0.06
Category members GO Category GO:0006355 regulation of transcription, DNA-dependent Database 0


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