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Query: GABRD

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
GABRD 0 0.626 1.780 -1.180

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
GABRD Ubiquitylation K402 0.626 _SVGVETGETK(gl)K_
GABRD Ubiquitylation K403 0.626 _SVGVETGETK(gl)K_

Background Information for GABRD:


Pubmed-GABRD »
Uniprot-GABRD »
Biogrid-GABRD »
ProteomicsDB-GABRD »

Tumorportal-GABRD »
COSMIC-GABRD »
GenomeRNAi-GABRD »
Genecards-GABRD


Protein-protein Interactions for GABRD
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait GABRD Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in GABRD
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Neurotrans-gated_channel_TM IPR006029 0.09
Category members Neur_chan_lig-bd IPR006202 0.09
Category members Neur_channel IPR006201 0.08
Category members GABAA/Glycine_rcpt IPR006028 0.04


Protein complexes (CORUM database) featuring GABRD
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring GABRD
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members Pathway Pathway_1184 KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION 0 1.89
Category members GO Category GO:0005887 integral to plasma membrane Database 1.69
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0007268 synaptic transmission Database 0.23
Category members GO Category GO:0006811 ion transport Database 0.18
Category members GO Category GO:0045211 postsynaptic membrane Database 0.06
Category members GO Category GO:0005230 extracellular ligand-gated ion channel activity Database 0
Category members GO Category GO:0034707 chloride channel complex Database 0
Category members Disease phenotype 1p36_deletion_syndrome 1p36 deletion syndrome Database 0
Category members Disease phenotype Generalized_epilepsy_with_febrile_seizures-plus_context Generalized epilepsy with febrile seizures-plus context Database 0
Category members Disease phenotype Juvenile_myoclonic_epilepsy Juvenile myoclonic epilepsy Database 0
Category members GO Category GO:0004890 GABA-A receptor activity Database 0
Category members GO Category GO:0005254 chloride channel activity Database 0
Category members GO Category GO:0006810 transport Database 0
Category members GO Category GO:0007165 signal transduction Database 0
Category members GO Category GO:0030054 cell junction Database 0


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