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Query: FUBP3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
FUBP3 1 2.933 -0.110 0.590 -0.886 -1.285 -0.518 -0.444 -0.041

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
FUBP3 Ubiquitylation K220 2.533 _ITGDAFK(gl)VQQAR_
FUBP3 Ubiquitylation K186 0.850 1.240 _GGETIK(gl)QLQER_
FUBP3 Ubiquitylation K526 0.642 0.714 _AWEDYYKK(gl)_
FUBP3 Phosphorylation S296 0.352 -0.021 _IQFKPDDGIS(ph)PER_

Background Information for FUBP3:


Pubmed-FUBP3 »
Uniprot-FUBP3 »
Biogrid-FUBP3 »
ProteomicsDB-FUBP3 »

Tumorportal-FUBP3 »
COSMIC-FUBP3 »
GenomeRNAi-FUBP3 »
Genecards-FUBP3


Protein-protein Interactions for FUBP3
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait AKAP8 Cat. description Hein, Mann, Cell 2015
Category members IP bait CCDC88A Cat. description Hein, Mann, Cell 2015
Category members IP bait CDK18 Cat. description Hein, Mann, Cell 2015
Category members IP bait GDI1 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRNPD Cat. description Hein, Mann, Cell 2015
Category members IP bait KIF21B Cat. description Hein, Mann, Cell 2015
Category members IP bait MATR3 Cat. description Hein, Mann, Cell 2015
Category members IP bait RHOA Cat. description Hein, Mann, Cell 2015
Category members IP bait SEC16A Cat. description Hein, Mann, Cell 2015


Protein Domains in FUBP3
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members KH_dom_type_2 IPR004044 0.34
Category members KH_dom IPR004087 0.23
Category members KH_dom_type_1 IPR004088 0.13


Protein complexes (CORUM database) featuring FUBP3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring FUBP3
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members DDR Literature pubmedid:24332808 Marechal et al., 2014 RPA-mediated recruitment INF
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members DDR Literature pubmedid:TBD2_UV_increased Elia et al, 2015 UV increased acetylation events Elia et al. INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0006351 transcription, DNA-templated Database 1.07
Category members GO Category GO:0045893 positive regulation of transcription, DNA-dependent Database 0.28
Category members GO Category GO:0010628 positive regulation of gene expression Database 0


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