bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: FAM21C

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
FAM21C 0 2.806

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
FAM21C Phosphorylation S352 1.396 1.410 _LTDEDFS(ph)PFGSGGGLFSGGK_
FAM21C Phosphorylation S539 0.868 0.679 _GLFS(ph)DEEDSEDLFSSQSASNLK_
FAM21C Phosphorylation S498 0.354 0.400 _AVAS(ph)PEATVSQTDENK_
FAM21C Phosphorylation S1142 -0.646 0.272 _GEADLFDSGDIFSTGTGS(ph)QSVER_
FAM21C Phosphorylation S288 0.363 0.241 _SRPTS(ph)FADELAAR_
FAM21C Phosphorylation S728 0.212 0.155 _KETVSEAPPLLFS(ph)DEEEKEAQLGVK_
FAM21C Phosphorylation S802 0.579 0.140 _TVLS(ph)LFDEEEDKMEDQNIIQAPQK_
FAM21C Phosphorylation S1144 -0.284 -0.045 _GEADLFDSGDIFSTGTGSQS(ph)VER_
FAM21C Phosphorylation T331 -0.774 _RT(ph)PSDDEEDNLFAPPK_
FAM21C Phosphorylation S333 -0.945 -0.894 _RTPS(ph)DDEEDNLFAPPK_

Background Information for FAM21C:


Pubmed-FAM21C »
Uniprot-FAM21C »
Biogrid-FAM21C »
ProteomicsDB-FAM21C »

Tumorportal-FAM21C »
COSMIC-FAM21C »
GenomeRNAi-FAM21C »
Genecards-FAM21C


Protein-protein Interactions for FAM21C
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait VPS26A Cat. description Hein, Mann, Cell 2015
Category members IP bait WASH3P Cat. description Hein, Mann, Cell 2015
Category members IP bait CAPZA2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CCDC53 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in FAM21C
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring FAM21C
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring FAM21C
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005769 early endosome Database 1.26
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0031901 early endosome membrane Database 0.58
Category members GO Category GO:0071203 WASH complex Database 0.31
Category members GO Category GO:0005768 endosome Database 0.29
Category members GO Category GO:0042147 retrograde transport, endosome to Golgi Database 0.26


.

© Copyright Svejstrup Laboratory 2015