bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: ESRP2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ESRP2 0 0.833 -0.550 0.730

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ESRP2 Ubiquitylation K278 0.103 _FFK(gl)GLNVAR_

Background Information for ESRP2:





Protein-protein Interactions for ESRP2

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait PPP6R1 Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS16 Cat. description Hein, Mann, Cell 2015
Category members IP bait HNRPLL Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ESRP2

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members RRM_dom IPR000504 4.34
Category members RNaseH-like_dom IPR012337 0


Protein complexes (CORUM database) featuring ESRP2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ESRP2

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members DDR Literature pubmedid:24332808 Marechal et al., 2014 RPA-mediated recruitment INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0006397 mRNA processing Database 3.76
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0003729 mRNA binding Database 1.38
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0005813 centrosome Database 0.75
Category members GO Category GO:0043484 regulation of RNA splicing Database 0


© Copyright Svejstrup Laboratory 2015