bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: ERI3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ERI3 0 0.590 -0.330 0.790

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ERI3 Ubiquitylation K276 -0.200 _QWINLK(gl)K_
ERI3 Ubiquitylation K331 -0.515 _GFIFK(gl)QTSKPF_

Background Information for ERI3:





Protein-protein Interactions for ERI3

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ARHGAP22 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CELF5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KCNJ5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PSMD9 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ERI3

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Exonuclease IPR006055 0
Category members RNaseH-like_dom IPR012337 0
Category members Exonuclease_RNaseT/DNA_pol3 IPR013520 0


Protein complexes (CORUM database) featuring ERI3

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ERI3

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0004527 exonuclease activity Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


© Copyright Svejstrup Laboratory 2015