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Query: EFNB1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
EFNB1 0 -0.310 0.450 -0.350

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
EFNB1 Phosphorylation S281 -0.946 0.541 _AAALS(ph)LSTLASPK_
EFNB1 Phosphorylation S283 -0.940 0.058 _AAALSLS(ph)TLASPK_
EFNB1 Phosphorylation T284 -0.851 0.002 _AAALSLS(ph)TLASPK_

Background Information for EFNB1:


Pubmed-EFNB1 »
Uniprot-EFNB1 »
Biogrid-EFNB1 »
ProteomicsDB-EFNB1 »

Tumorportal-EFNB1 »
COSMIC-EFNB1 »
GenomeRNAi-EFNB1 »
Genecards-EFNB1


Protein-protein Interactions for EFNB1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATP1B3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C16orf54 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CDHR5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CEACAM21 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait EFNB2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ERGIC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HLA-DPA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HLA-DQA1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDH12 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PICK1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PVR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RGS3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC39A4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC39A5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM213 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TNFSF8 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TSPAN5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait WDFY2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZDHHC11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in EFNB1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ephrin IPR001799 0.06
Category members Cupredoxin IPR008972 0


Protein complexes (CORUM database) featuring EFNB1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 5190 TIAM1-EFNB1-EPHA2 complex Database 0


Categories featuring EFNB1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005887 integral to plasma membrane Database 1.69
Category members GO Category GO:0007267 cell-cell signaling Database 0.94
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0046875 ephrin receptor binding Database 0.3
Category members Pathway Pathway_629 PID_EPHB_FWD_PATHWAY 0 0.14
Category members GO Category GO:0007411 axon guidance Database 0.13
Category members GO Category GO:0045121 membrane raft Database 0.11
Category members GO Category GO:0045202 synapse Database 0.06
Category members GO Category GO:0042102 positive regulation of T cell proliferation Database 0.04
Category members Pathway Pathway_1034 KEGG_AXON_GUIDANCE 0 0.04
Category members Pathway Pathway_547 PID_EPHRINB_REV_PATHWAY 0 0
Category members GO Category GO:0001755 neural crest cell migration Database 0
Category members GO Category GO:0007155 cell adhesion Database 0
Category members GO Category GO:0009880 embryonic pattern specification Database 0


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