bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: DDX3Y

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
DDX3Y 2 5.924 -1.430 2.020 0.081 -0.794 -0.166 -0.062 -0.025

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
DDX3Y Ubiquitylation K93 0.657 1.846 _GK(gl)SSFFSDR_
DDX3Y Ubiquitylation K130 1.572 1.502 _SGFGK(gl)FER_
DDX3Y Ubiquitylation K347 -0.406 0.360 _GK(gl)IGLDFCK_
DDX3Y Phosphorylation S104 -0.231 0.320 _SSFFSDRGSGS(ph)R_
DDX3Y Phosphorylation S102 0.008 0.230 _SSFFSDRGS(ph)GSR_
DDX3Y Phosphorylation S603 -0.330 _SS(ph)RFSGGFGAR_
DDX3Y Phosphorylation S602 -0.349 _S(ph)SRFSGGFGAR_
DDX3Y Phosphorylation S606 -0.248 -0.447 _FS(ph)GGFGAR_
DDX3Y Ubiquitylation K78 1.311 _DK(gl)DAYSSFGSR_
DDX3Y Phosphorylation S94 0.172 _S(ph)SFFSDRGSGSR_
DDX3Y Ubiquitylation K503 -0.796 _SGK(gl)SPILVATAVAAR_

Background Information for DDX3Y:





Protein-protein Interactions for DDX3Y

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait NUDCD2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in DDX3Y

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members Helicase_C IPR001650 2.48
Category members Helicase_ATP-bd IPR014001 2.48
Category members DEAD/DEAH_box_helicase_dom IPR011545 0.35
Category members RNA_helicase_DEAD_Q_motif IPR014014 0.24


Protein complexes (CORUM database) featuring DDX3Y

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring DDX3Y

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0004386 helicase activity Database 2.49
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members GO Category GO:0003676 nucleic acid binding Database 0.83
Category members GO Category GO:0008026 ATP-dependent helicase activity Database 0.79
Category members Disease phenotype Partial_chromosome_Y_deletion Partial chromosome Y deletion Database 0.62
Category members Pathway Pathway_483 KEGG_RIG_I_LIKE_RECEPTOR_SIGNALING_PATHWAY 0 0


© Copyright Svejstrup Laboratory 2015