bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: CUL9

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
CUL9 0 -1.523 0.460 -0.720

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
CUL9 Ubiquitylation K986 -2.376 _EGSPGGAVRPLLK(gl)R_
CUL9 Ubiquitylation K1881 0.853 _ILK(gl)AHGEK_

Background Information for CUL9:


Pubmed-CUL9 »
Uniprot-CUL9 »
Biogrid-CUL9 »
ProteomicsDB-CUL9 »

Tumorportal-CUL9 »
COSMIC-CUL9 »
GenomeRNAi-CUL9 »
Genecards-CUL9


Protein-protein Interactions for CUL9
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait APEX2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GLMN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAB6B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TP53 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in CUL9
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members ARM-type_fold IPR016024 9.26
Category members Cullin_homology IPR016158 1.15
Category members Cullin_N IPR001373 0.9
Category members Cullin_neddylation_domain IPR019559 0.68
Category members UBA-like IPR009060 0.17
Category members CPH_domain IPR021097 0.13
Category members Znf_RING IPR001841 0
Category members Znf_C6HC IPR002867 0
Category members APC_su10/DOC_dom IPR004939 0
Category members Galactose-bd-like IPR008979 0


Protein complexes (CORUM database) featuring CUL9
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring CUL9
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005488 binding Database 9.32
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0006511 ubiquitin-dependent protein catabolic process Database 3.57
Category members GO Category GO:0031625 ubiquitin protein ligase binding Database 2.54
Category members GO Category GO:0031461 cullin-RING ubiquitin ligase complex Database 0.77
Category members GO Category GO:0008270 zinc ion binding Database 0.29


.

© Copyright Svejstrup Laboratory 2015