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Query: CCDC50

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
CCDC50 0 1.933 0.170 0.180

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
CCDC50 Ubiquitylation K215 0.344 1.213 _LLMAEEKK(gl)_
CCDC50 Ubiquitylation K119 0.480 0.910 _LLQEK(gl)ELQEEK_
CCDC50 Ubiquitylation K152 0.029 0.809 _AYADSYYYEDGGMK(gl)PR_
CCDC50 Ubiquitylation K107 -0.119 0.640 _IQEK(gl)KDEDIAR_
CCDC50 Ubiquitylation K108 -0.496 0.411 _IQEKK(gl)DEDIAR_
CCDC50 Ubiquitylation K129 -0.775 -0.097 _K(gl)HFPEFPATR_
CCDC50 Ubiquitylation K238 -0.393 -0.442 _KQDPEWK(gl)PK_
CCDC50 Ubiquitylation K232 -0.174 -0.504 _K(gl)QDPEWKPK_
CCDC50 Ubiquitylation K240 -0.435 -0.884 _KQDPEWKPK(gl)TAK_
CCDC50 Ubiquitylation K181 0.540 _K(gl)LQEEELLATQVDMR_
CCDC50 Ubiquitylation K214 0.240 _LLM(ox)AEEK(gl)K_

Background Information for CCDC50:


Pubmed-CCDC50 »
Uniprot-CCDC50 »
Biogrid-CCDC50 »
ProteomicsDB-CCDC50 »

Tumorportal-CCDC50 »
COSMIC-CCDC50 »
GenomeRNAi-CCDC50 »
Genecards-CCDC50


Protein-protein Interactions for CCDC50
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CALML3 Cat. description Hein, Mann, Cell 2015
Category members IP bait CORO1C Cat. description Hein, Mann, Cell 2015
Category members IP bait LIMA1 Cat. description Hein, Mann, Cell 2015
Category members IP bait MYH9 Cat. description Hein, Mann, Cell 2015
Category members IP bait CCDC50 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in CCDC50
Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring CCDC50
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring CCDC50
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members Disease phenotype Autosomal_dominant_nonsyndromic_sensorineural_deafness_type_DFNA Autosomal dominant nonsyndromic sensorineural deafness type DFNA Database 0


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