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Query: BANF1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
BANF1 0 -0.674 0.830 -0.530
BANF1 0 -0.674 0.830 -0.530 -0.992 -0.500

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
BANF1 Ubiquitylation K64 0.818 _EWLK(gl)DTCGANAK_

Background Information for BANF1:


Pubmed-BANF1 »
Uniprot-BANF1 »
Biogrid-BANF1 »
ProteomicsDB-BANF1 »

Tumorportal-BANF1 »
COSMIC-BANF1 »
GenomeRNAi-BANF1 »
Genecards-BANF1


Protein-protein Interactions for BANF1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CBX1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CENPQ Cat. description Hein, Mann, Cell 2015
Category members IP bait MAD2L2 Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP4C Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL10 Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL35 Cat. description Hein, Mann, Cell 2015
Category members IP bait SDCCAG8 Cat. description Hein, Mann, Cell 2015


Protein Domains in BANF1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members BAF_prot IPR004122 0


Protein complexes (CORUM database) featuring BANF1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 5613 Emerin complex 25 Database 0.04
Category members Corum 5609 Emerin regulatory complex Database 0


Categories featuring BANF1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0016032 viral process Database INF
Category members Pathway Pathway_197 REACTOME_HIV_INFECTION 0 12.07
Category members GO Category GO:0000278 mitotic cell cycle Database 10.63
Category members Pathway Pathway_196 REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS 0 9.67
Category members Pathway Pathway_376 REACTOME_HIV_LIFE_CYCLE 0 9.45
Category members GO Category GO:0019048 modulation by virus of host morphology or physiology Database 7.81
Category members Pathway Pathway_1206 REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS 0 6.87
Category members GO Category GO:0007077 mitotic nuclear envelope disassembly Database 5.8
Category members GO Category GO:0005694 chromosome Database 3.87
Category members GO Category GO:0003677 DNA binding Database 1.53
Category members Pathway Pathway_859 REACTOME_EARLY_PHASE_OF_HIV_LIFE_CYCLE 0 1.34
Category members Pathway Pathway_981 REACTOME_INTEGRATION_OF_PROVIRUS 0 0.76
Category members GO Category GO:0007084 mitotic nuclear envelope reassembly Database 0.24
Category members Pathway Pathway_1313 REACTOME_APOBEC3G_MEDIATED_RESISTANCE_TO_HIV1_INFECTION 0 0
Category members GO Category GO:0009615 response to virus Database 0
Category members GO Category GO:0015074 DNA integration Database 0


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