bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: ATP7B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ATP7B 0 -0.388 1.870 -1.230

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ATP7B Ubiquitylation K489 -0.338 -0.050 _AVAPQK(gl)CFLQIK_
ATP7B Ubiquitylation K1028 -0.683 _TVMFDK(gl)TGTITHGVPR_

Background Information for ATP7B:


Pubmed-ATP7B »
Uniprot-ATP7B »
Biogrid-ATP7B »
ProteomicsDB-ATP7B »

Tumorportal-ATP7B »
COSMIC-ATP7B »
GenomeRNAi-ATP7B »
Genecards-ATP7B


Protein-protein Interactions for ATP7B
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait CLEC2D Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GRPR Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ITM2A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MANSC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NRG1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NTRK3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHGB1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM223 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ATP7B
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Cation_transp_P_typ_ATPase IPR001757 0.08
Category members ATPase_P-typ_transduc_dom_A IPR008250 0.08
Category members HeavyMe-assoc_HMA IPR006121 0
Category members HMA_Cu_ion-bd IPR006122 0
Category members HAD-like_dom IPR023214 0
Category members Cation_transp_P-typ_ATPase_IB IPR027256 0


Protein complexes (CORUM database) featuring ATP7B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ATP7B
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0005887 integral to plasma membrane Database 1.69
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0048471 perinuclear region of cytoplasm Database 0.39
Category members GO Category GO:0016023 cytoplasmic membrane-bounded vesicle Database 0.17
Category members GO Category GO:0019829 cation-transporting ATPase activity Database 0.15
Category members GO Category GO:0005802 trans-Golgi network Database 0.13
Category members GO Category GO:0055085 transmembrane transport Database 0.12
Category members GO Category GO:0005770 late endosome Database 0.09
Category members Pathway Pathway_99 REACTOME_TRANSMEMBRANE_TRANSPORT_OF_SMALL_MOLECULES 0 0.08
Category members GO Category GO:0006878 cellular copper ion homeostasis Database 0.04
Category members GO Category GO:0016323 basolateral plasma membrane Database 0.04
Category members Pathway Pathway_182 REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES 0 0
Category members Pathway Pathway_183 REACTOME_ION_CHANNEL_TRANSPORT 0 0
Category members GO Category GO:0000139 Golgi membrane Database 0
Category members GO Category GO:0004008 copper-exporting ATPase activity Database 0
Category members GO Category GO:0005507 copper ion binding Database 0
Category members GO Category GO:0006812 cation transport Database 0
Category members GO Category GO:0006825 copper ion transport Database 0
Category members GO Category GO:0006882 cellular zinc ion homeostasis Database 0
Category members GO Category GO:0007595 lactation Database 0
Category members GO Category GO:0015677 copper ion import Database 0
Category members GO Category GO:0015680 intracellular copper ion transport Database 0
Category members GO Category GO:0030001 metal ion transport Database 0
Category members GO Category GO:0034220 ion transmembrane transport Database 0
Category members GO Category GO:0046688 response to copper ion Database 0
Category members GO Category GO:0046872 metal ion binding Database 0
Category members GO Category GO:0051208 sequestering of calcium ion Database 0
Category members GO Category GO:0060003 copper ion export Database 0


.

© Copyright Svejstrup Laboratory 2015