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Query: APOBEC3C

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
APOBEC3C 0 4.069 -0.880 1.220 -0.141 0.306 1.390 0.929

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
APOBEC3C Ubiquitylation K197 0.530 _GLK(gl)TNFR_

Background Information for APOBEC3C:





Protein-protein Interactions for APOBEC3C

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait EIF3I Cat. description Hein, Mann, Cell 2015
Category members IP bait RPL10 Cat. description Hein, Mann, Cell 2015
Category members IP bait RRS1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait XPC Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZBTB48 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in APOBEC3C

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Cytidine_deaminase-like IPR016193 0.07
Category members APOBEC_N IPR013158 0.04
Category members APOBEC_C IPR007904 0


Protein complexes (CORUM database) featuring APOBEC3C

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring APOBEC3C

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0019048 modulation by virus of host morphology or physiology Database 7.81
Category members GO Category GO:0008270 zinc ion binding Database 0.29
Category members GO Category GO:0003824 catalytic activity Database 0.11
Category members GO Category GO:0051607 defense response to virus Database 0.07
Category members GO Category GO:0045087 innate immune response Database 0.05
Category members GO Category GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines Database 0.04
Category members GO Category GO:0010529 negative regulation of transposition Database 0.01
Category members GO Category GO:0009972 cytidine deamination Database 0
Category members GO Category GO:0045071 negative regulation of viral genome replication Database 0


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