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Query: AMD1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
AMD1 0 -1.714 1.390 -0.600

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
AMD1 Ubiquitylation K291 -0.884 -0.830 _FVTTLFVNQSSK(gl)CR_
AMD1 Ubiquitylation K201 -1.024 _DGVTAK(gl)DVTR_
AMD1 Ubiquitylation K301 -1.418 _TVLASPQK(gl)IEGFKR_
AMD1 Ubiquitylation K306 -1.912 _TVLASPQKIEGFK(gl)R_

Background Information for AMD1:


Pubmed-AMD1 »
Uniprot-AMD1 »
Biogrid-AMD1 »
ProteomicsDB-AMD1 »

Tumorportal-AMD1 »
COSMIC-AMD1 »
GenomeRNAi-AMD1 »
Genecards-AMD1


Protein-protein Interactions for AMD1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ADCYAP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait BMP15 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait BMP7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C19orf21 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CCDC120 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CLEC11A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DKKL1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DNASE2B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DOK3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FBXO4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GLTP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait GRINL1A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HDAC11 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait KPTN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait POMC Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait POP4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRELP Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PTH2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RTBDN Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SHC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SHC4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNX21 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SSX2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TCF25 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in AMD1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members S-AdoMet_deCO2ase_core IPR016067 0


Protein complexes (CORUM database) featuring AMD1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring AMD1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0044281 small molecule metabolic process Database 0.35
Category members Pathway Pathway_400 KEGG_CYSTEINE_AND_METHIONINE_METABOLISM 0 0.04
Category members GO Category GO:0034641 cellular nitrogen compound metabolic process Database 0.01
Category members Pathway Pathway_135 KEGG_ARGININE_AND_PROLINE_METABOLISM 0 0.01
Category members Pathway Pathway_17 REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES 0 0
Category members Pathway Pathway_401 REACTOME_METABOLISM_OF_POLYAMINES 0 0
Category members GO Category GO:0004014 adenosylmethionine decarboxylase activity Database 0
Category members GO Category GO:0006595 polyamine metabolic process Database 0
Category members GO Category GO:0006597 spermine biosynthetic process Database 0
Category members GO Category GO:0008295 spermidine biosynthetic process Database 0


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