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Query: ABCB9

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
ABCB9 0 0.559 0.020 0.380

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
ABCB9 Ubiquitylation K376 0.179 _ASNTAEETISAMK(gl)TVR_

Background Information for ABCB9:


Pubmed-ABCB9 »
Uniprot-ABCB9 »
Biogrid-ABCB9 »
ProteomicsDB-ABCB9 »

Tumorportal-ABCB9 »
COSMIC-ABCB9 »
GenomeRNAi-ABCB9 »
Genecards-ABCB9


Protein-protein Interactions for ABCB9
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait ATP2B2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C3AR1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait CNGA3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LRRC8B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHA3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHAC1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PCDHGA5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SLC17A2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TMEM9B Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in ABCB9
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members P-loop_NTPase IPR027417 2.83
Category members AAA+_ATPase IPR003593 0.38
Category members ABC1_TM_dom IPR011527 0.33
Category members ABC_transporter-like IPR003439 0.15
Category members ABC_transptr_TM_dom IPR001140 0.06


Protein complexes (CORUM database) featuring ABCB9
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring ABCB9
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0000166 nucleotide binding Database 5.91
Category members GO Category GO:0005524 ATP binding Database 5.54
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0016887 ATPase activity Database 2.28
Category members GO Category GO:0005886 plasma membrane Database 1.21
Category members GO Category GO:0005765 lysosomal membrane Database 0.82
Category members GO Category GO:0017111 nucleoside-triphosphatase activity Database 0.5
Category members Pathway Pathway_756 KEGG_ABC_TRANSPORTERS 0 0.13
Category members GO Category GO:0055085 transmembrane transport Database 0.12
Category members GO Category GO:0015421 oligopeptide-transporting ATPase activity Database 0.11
Category members GO Category GO:0015833 peptide transport Database 0.11
Category members GO Category GO:0042626 ATPase activity, coupled to transmembrane movement of substances Database 0.09
Category members GO Category GO:0042825 TAP complex Database 0.04
Category members GO Category GO:0046978 TAP1 binding Database 0.04
Category members GO Category GO:0046979 TAP2 binding Database 0.04
Category members GO Category GO:0046980 tapasin binding Database 0.04
Category members Pathway Pathway_74 KEGG_LYSOSOME 0 0
Category members GO Category GO:0001916 positive regulation of T cell mediated cytotoxicity Database 0
Category members GO Category GO:0006810 transport Database 0
Category members GO Category GO:0022891 substrate-specific transmembrane transporter activity Database 0
Category members GO Category GO:0030176 integral to endoplasmic reticulum membrane Database 0
Category members GO Category GO:0042288 MHC class I protein binding Database 0
Category members GO Category GO:0042605 peptide antigen binding Database 0
Category members GO Category GO:0042803 protein homodimerization activity Database 0


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