Results for the Category
nuclear mRNA surveillance
(GO:0071028)
| RNAi screen result | RNAPII IP (MG132) | CSB IP | CSB IP (MG132) | Chrom. | Chrom. (MG132) | Ubi /Phospo | Ubi /Phospho (MG132) |
| W | |||||||
| Gene name | MGoogle Score | RNAi high | RNAi low | RNAPII-IP (MG132) | CSB-IP | CSB-IP (MG132) | Chrom. | Chrom. (MG132) |
|---|---|---|---|---|---|---|---|---|
| XRN1 | 0 | 1.680 | -1.120 | |||||
| XRN1 | 0 | 1.680 | -1.120 | -0.304 | -0.943 | 0.164 | ||
| EXOSC9 | 0 | 0.080 | 0.519 | 0.128 | -0.495 | 0.107 | ||
| EXOSC10 | 0 | 0.160 | -0.170 | -0.327 | -0.108 | -0.734 | -0.003 |
| Gene name | PTM type | PTM site | UV | UV (MG132) | Sequence |
|---|---|---|---|---|---|
| EXOSC10 | Ubiquitylation | K591 | -1.148 | _SEVAAGVK(gl)K_ | |
| EXOSC10 | Ubiquitylation | K592 | -1.148 | _SEVAAGVK(gl)K_ | |
| EXOSC10 | Ubiquitylation | K680 | -1.926 | _GPLTVAQKK(gl)_ | |
| EXOSC10 | Ubiquitylation | K710 | -1.867 | _APVSQAAK(gl)FDPSTK_ | |
| EXOSC10 | Ubiquitylation | K716 | -2.215 | _FDPSTK(gl)IYEISNR_ | |
| EXOSC9 | Ubiquitylation | K52 | 0.195 | _ISFGTDYGCCIVELGK(gl)TR_ | |
| EXOSC9 | Phosphorylation | S306 | 0.254 | 0.180 | _APIDTS(ph)DVEEK_ |
| XRN1 | Phosphorylation | S814 | -0.523 | _ENEVQSSHHGEPPSEEHLS(ph)PQSFAM(ox)K_ |
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