bioLOGIC Category
Results for the Category
Upf complex (UPF1, UPF2, UPF3a)
(812)
| RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
| W |
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| Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
|
UPF1
|
0
|
|
|
-0.362
|
-0.954
|
-0.781
|
-0.966
|
-0.333
|
|
UPF2
|
0
|
0.020
|
-0.140
|
|
|
|
-0.668
|
-0.131
|
| Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
|
UPF1
|
Ubiquitylation
|
K321
|
|
0.611
|
_LK(gl)ESQTQDNITVR_
|
|
UPF1
|
Ubiquitylation
|
K340
|
-1.693
|
|
_WDLGLNKK(gl)_
|
|
UPF1
|
Ubiquitylation
|
K378
|
-1.658
|
|
_YK(gl)GDLAPLWK_
|
|
UPF1
|
Ubiquitylation
|
K638
|
-2.024
|
-0.456
|
_LAK(gl)MQFR_
|
|
UPF1
|
Ubiquitylation
|
K790
|
0.647
|
0.880
|
_ITTK(gl)LLK_
|
|
UPF1
|
Ubiquitylation
|
K793
|
-2.075
|
|
_LLK(gl)AGAKPDQIGIITPYEGQR_
|
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UPF1
|
Phosphorylation
|
S1107
|
0.100
|
0.763
|
_SQIDVALS(ph)QDSTYQGER_
|
© Copyright Svejstrup Laboratory 2015