bioLOGIC Category
Results for the Category
TFIIH transcription factor complex (ERCC2, ERCC3, GTF2H1, CDK7, CCNH, GTF2H2)
(5495)
| RNAi screen result
|
RNAPII IP (MG132) |
CSB IP |
CSB IP (MG132) |
Chrom. |
Chrom. (MG132) |
Ubi /Phospo |
Ubi /Phospho (MG132) |
| W |
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| Gene name |
MGoogle Score |
RNAi high |
RNAi low |
RNAPII-IP (MG132) |
CSB-IP |
CSB-IP (MG132) |
Chrom. |
Chrom. (MG132) |
|
GTF2H1
|
3
|
-0.470
|
0.340
|
0.260
|
2.656
|
2.859
|
1.092
|
0.966
|
|
ERCC2
|
2
|
-0.590
|
1.060
|
-0.491
|
|
1.066
|
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GTF2H2
|
2
|
0.890
|
-0.020
|
0.105
|
2.323
|
2.292
|
1.092
|
0.150
|
|
GTF2H2C
|
2
|
|
|
0.105
|
2.323
|
2.292
|
1.092
|
0.150
|
|
ERCC3
|
2
|
-1.110
|
1.490
|
|
2.619
|
2.418
|
|
0.499
|
|
CCNH
|
0
|
1.480
|
-0.550
|
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| Gene name |
PTM type |
PTM site |
UV |
UV (MG132) |
Sequence |
|
CCNH
|
Ubiquitylation
|
K189
|
0.418
|
|
_K(gl)TADDFLNR_
|
|
ERCC2
|
Ubiquitylation
|
K268
|
5.973
|
1.957
|
_CQGNLETLQK(gl)TVLR_
|
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ERCC2
|
Ubiquitylation
|
K507
|
|
-2.034
|
_GNDQVAISSK(gl)FETR_
|
|
GTF2H1
|
Ubiquitylation
|
K240
|
2.338
|
|
_LNTGSK(gl)DLFAECAK_
|
|
GTF2H2
|
Ubiquitylation
|
K42
|
-0.223
|
|
_ATIEDILFKAK(gl)_
|
|
GTF2H2
|
Ubiquitylation
|
K77
|
|
-1.015
|
_TMEDQDLK(gl)PNR_
|
|
GTF2H2
|
Ubiquitylation
|
K116
|
|
-1.309
|
_RAEK(gl)LTELSGNPR_
|
|
GTF2H2C
|
Ubiquitylation
|
K42
|
-0.223
|
|
_ATIEDILFKAK(gl)_
|
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GTF2H2C
|
Ubiquitylation
|
K77
|
|
-1.015
|
_TMEDQDLK(gl)PNR_
|
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GTF2H2C
|
Ubiquitylation
|
K116
|
|
-1.309
|
_RAEK(gl)LTELSGNPR_
|
© Copyright Svejstrup Laboratory 2015