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Query: YOD1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
YOD1 0 0.931

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
YOD1 Ubiquitylation K257 0.132 0.799 _IDRFGEDAGYTK(gl)R_
YOD1 Ubiquitylation K135 -0.053 0.087 _SSPAFTK(gl)R_

Background Information for YOD1:


Pubmed-YOD1 »
Uniprot-YOD1 »
Biogrid-YOD1 »
ProteomicsDB-YOD1 »

Tumorportal-YOD1 »
COSMIC-YOD1 »
GenomeRNAi-YOD1 »
Genecards-YOD1


Protein-protein Interactions for YOD1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait GPSM1 Cat. description Hein, Mann, Cell 2015
Category members IP bait POLD1 Cat. description Hein, Mann, Cell 2015
Category members IP bait CCDC51 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FCF1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in YOD1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members OTU IPR003323 0.18


Protein complexes (CORUM database) featuring YOD1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring YOD1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0004843 ubiquitin-specific protease activity Database 3.28
Category members GO Category GO:0030968 endoplasmic reticulum unfolded protein response Database 1.35
Category members GO Category GO:0071108 protein K48-linked deubiquitination Database 0.88
Category members Pathway Pathway_136 KEGG_LIMONENE_AND_PINENE_DEGRADATION 0 0.87
Category members GO Category GO:0030433 ER-associated ubiquitin-dependent protein catabolic process Database 0.33
Category members GO Category GO:0070536 protein K63-linked deubiquitination Database 0.29
Category members Pathway Pathway_144 KEGG_BIOSYNTHESIS_OF_UNSATURATED_FATTY_ACIDS 0 0.13
Category members GO Category GO:0006520 cellular amino acid metabolic process Database 0
Category members GO Category GO:0035523 protein K29-linked deubiquitination Database 0
Category members GO Category GO:0035871 protein K11-linked deubiquitination Database 0
Category members GO Category GO:0046872 metal ion binding Database 0


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