bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: WTAP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
WTAP 0 0.288 -0.800 0.600
WTAP 0 0.288 -0.800 0.600 0.749 -0.107 0.331

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
WTAP Phosphorylation S306 -0.152 -0.397 _EGNTTEDDFPSS(ph)PGNGNK_
WTAP Ubiquitylation K83 -0.736 _LATK(gl)EQEMQECTTQIQYLK_

Background Information for WTAP:





Protein-protein Interactions for WTAP

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait METTL3 Cat. description Hein, Mann, Cell 2015
Category members IP bait SOD1 Cat. description Hein, Mann, Cell 2015
Category members IP bait SRSF1 Cat. description Hein, Mann, Cell 2015
Category members IP bait FAM175A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IKZF1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SH3BP5L Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF645 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in WTAP

Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring WTAP

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 351 Spliceosome Database 9.3
Category members Corum 929 CEN complex Database 3.25


Categories featuring WTAP

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005654 nucleoplasm Database INF
Category members DDR Literature pubmedid:24055347 Jungmichel et al., 2013 UV-stimulated poly(ADP-Ribosyl)ation targets Jungmichel et al., 2013 INF
Category members GO Category GO:0008380 RNA splicing Database 10.77
Category members GO Category GO:0006397 mRNA processing Database 3.76
Category members GO Category GO:0031965 nuclear membrane Database 2.59
Category members GO Category GO:0007049 cell cycle Database 0.69


© Copyright Svejstrup Laboratory 2015