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Query: VPS26B

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
VPS26B 1 4.350 1.420 -0.800 1.049 1.432

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
VPS26B Phosphorylation S304 1.869 _SMS(ph)HQAAIASQR_

Background Information for VPS26B:





Protein-protein Interactions for VPS26B

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait VPS26B Cat. description Hein, Mann, Cell 2015
Category members IP bait C9orf156 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LOXL3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait MRM1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VPS26A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VPS26B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZFC3H1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in VPS26B

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Vps26-related IPR028934 0.08
Category members Ig_E-set IPR014756 0


Protein complexes (CORUM database) featuring VPS26B

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members Corum 1060 Retromer complex (SNX1, SNX2, VPS35, VPS29, VPS26B) Database 0


Categories featuring VPS26B

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0030904 retromer complex Database 0.14
Category members GO Category GO:0007034 vacuolar transport Database 0


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