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Query: VPS13D

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
VPS13D 1 2.519 1.100 -0.610 1.859 0.868 0.632 0.237

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
VPS13D Phosphorylation S1138 0.401 _EKDDLS(ph)PQPLMTDFER_
VPS13D Phosphorylation S1042 -0.224 -0.170 _AQS(ph)PVSGPNVAHLTDGATLNDR_
VPS13D Phosphorylation T1761 -0.222 _EVQDKDYPLT(ph)PPPS(ph)PTVDEPK_
VPS13D Phosphorylation S1765 -0.222 _EVQDKDYPLT(ph)PPPS(ph)PTVDEPK_
VPS13D Ubiquitylation K2668 -0.388 _ALLACQGQLKK(gl)_

Background Information for VPS13D:


Pubmed-VPS13D »
Uniprot-VPS13D »
Biogrid-VPS13D »
ProteomicsDB-VPS13D »

Tumorportal-VPS13D »
COSMIC-VPS13D »
GenomeRNAi-VPS13D »
Genecards-VPS13D


Protein-protein Interactions for VPS13D
Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in VPS13D
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members UBA/Ts_N IPR000449 0.34
Category members UBA-like IPR009060 0.17
Category members VPSAP_dom IPR009543 0.17
Category members UBA/transl_elong_EF1B_N_euk IPR015940 0.04


Protein complexes (CORUM database) featuring VPS13D
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring VPS13D
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF


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