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Query: VPS13C

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
VPS13C 1 0.090 2.060 -1.250

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
VPS13C Phosphorylation S737 0.090 _TTNSS(ph)LEEIMDK_

Background Information for VPS13C:





Protein-protein Interactions for VPS13C

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait DNAJC7 Cat. description Hein, Mann, Cell 2015
Category members IP bait ARPC5 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait C4orf6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait DNAJC7 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAF2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait FAM78B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait HMGCLL1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait IER3IP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait LGALS12 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAB1A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAB30 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RAB9A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait RNF19B Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait UBXN4 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VAPA Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VAPB Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in VPS13C

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members VPSAP_dom IPR009543 0.17
Category members Autophagy-rel_C IPR015412 0


Protein complexes (CORUM database) featuring VPS13C

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring VPS13C

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


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