bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: UBXN6

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
UBXN6 0 -0.467

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
UBXN6 Ubiquitylation K24 -0.214 _LK(gl)ESVGEK_
UBXN6 Ubiquitylation K202 -0.724 _LQNK(gl)VFQER_
UBXN6 Ubiquitylation K30 -0.254 _LKESVGEK(gl)AHK_

Background Information for UBXN6:


Pubmed-UBXN6 »
Uniprot-UBXN6 »
Biogrid-UBXN6 »
ProteomicsDB-UBXN6 »

Tumorportal-UBXN6 »
COSMIC-UBXN6 »
GenomeRNAi-UBXN6 »
Genecards-UBXN6


Protein-protein Interactions for UBXN6
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait UBXN6 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in UBXN6
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members UBX_dom IPR001012 0.08
Category members PUG-dom IPR006567 0
Category members PUB_domain IPR018997 0


Protein complexes (CORUM database) featuring UBXN6
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring UBXN6
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005634 nucleus Database INF
Category members GO Category GO:0005730 nucleolus Database 13.38
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0005815 microtubule organizing center Database 0.39
Category members GO Category GO:0003674 molecular_function Database 0.08
Category members GO Category GO:0008150 biological_process Database 0


.

© Copyright Svejstrup Laboratory 2015