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Query: UBAP1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
UBAP1 1 1.847 0.360 -0.500

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
UBAP1 Ubiquitylation K153 0.169 1.644 _IAEAEAK(gl)VNSK_
UBAP1 Ubiquitylation K241 0.204 1.090 _TIDEK(gl)EELR_
UBAP1 Ubiquitylation K165 -0.552 0.860 _SGPEGDSK(gl)MSFSK_

Background Information for UBAP1:


Pubmed-UBAP1 »
Uniprot-UBAP1 »
Biogrid-UBAP1 »
ProteomicsDB-UBAP1 »

Tumorportal-UBAP1 »
COSMIC-UBAP1 »
GenomeRNAi-UBAP1 »
Genecards-UBAP1


Protein-protein Interactions for UBAP1
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait TSG101 Cat. description Hein, Mann, Cell 2015
Category members IP bait VPS28 Cat. description Hein, Mann, Cell 2015
Category members IP bait UBAP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait VPS28 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in UBAP1
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members UBA-like IPR009060 0.17
Category members UBA/transl_elong_EF1B_N_euk IPR015940 0.04


Protein complexes (CORUM database) featuring UBAP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring UBAP1
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005829 cytosol Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0015031 protein transport Database 3.48
Category members GO Category GO:0043130 ubiquitin binding Database 1.22
Category members GO Category GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway Database 0.09
Category members GO Category GO:0000813 ESCRT I complex Database 0.04


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