bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: TRPT1

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TRPT1 0 -0.724 0.600 -0.630

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TRPT1 Phosphorylation S242 -0.504 -0.294 _KPLSLAGDEETECQSS(ph)PK_
TRPT1 Phosphorylation S241 -0.430 -0.380 _KPLSLAGDEETECQS(ph)SPK_

Background Information for TRPT1:





Protein-protein Interactions for TRPT1

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait TRPT1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TRPT1

Domain name Domain Description TC-NER relevance -log10(p-value)


Protein complexes (CORUM database) featuring TRPT1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TRPT1

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation Database 0.22
Category members GO Category GO:0045859 regulation of protein kinase activity Database 0.01
Category members GO Category GO:0008665 2'-phosphotransferase activity Database 0
Category members GO Category GO:0016772 transferase activity, transferring phosphorus-containing groups Database 0


© Copyright Svejstrup Laboratory 2015