bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: THUMPD2

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
THUMPD2 0 -0.353 0.810 -1.000

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
THUMPD2 Ubiquitylation K464 -0.353 _TASTSFEASNHK(gl)FLDR_
THUMPD2 Ubiquitylation K121 -0.639 _NLLELDAK(gl)K_
THUMPD2 Ubiquitylation K122 -0.639 _NLLELDAK(gl)K_

Background Information for THUMPD2:


Pubmed-THUMPD2 »
Uniprot-THUMPD2 »
Biogrid-THUMPD2 »
ProteomicsDB-THUMPD2 »

Tumorportal-THUMPD2 »
COSMIC-THUMPD2 »
GenomeRNAi-THUMPD2 »
Genecards-THUMPD2


Protein-protein Interactions for THUMPD2
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait THUMPD2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in THUMPD2
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Methyltransf_11 IPR013216 0.2
Category members RNA_methylase_dom IPR000241 0.08
Category members SAM-dependent_MTases-like IPR029063 0.04
Category members Small_mtfrase_dom IPR007848 0.01
Category members UbiE/COQ5_MeTrFase IPR004033 0
Category members THUMP IPR004114 0


Protein complexes (CORUM database) featuring THUMPD2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring THUMPD2
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0003723 RNA binding Database INF
Category members GO Category GO:0008152 metabolic process Database 0
Category members GO Category GO:0008168 methyltransferase activity Database 0


.

© Copyright Svejstrup Laboratory 2015