bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »
bioLOGIC Data

bioLOGIC Data


Exact search

Query: TBCB

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
TBCB 2 9.086 -0.440 2.200 -1.269 0.574 0.715

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
TBCB Phosphorylation S110 3.125 2.423 _YTIS(ph)QEAYDQR_
TBCB Ubiquitylation K38 0.412 0.905 _SLTIAEFK(gl)CK_
TBCB Ubiquitylation K153 -0.141 -0.224 _LAEEK(gl)AQASSIPVGSR_
TBCB Ubiquitylation K106 0.291 _VEK(gl)YTISQEAYDQR_
TBCB Ubiquitylation K203 -0.478 _YDEPLGK(gl)NDGSVNGKR_

Background Information for TBCB:





Protein-protein Interactions for TBCB

Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait TBCB Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in TBCB

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Ubiquitin-rel_dom IPR029071 1.79
Category members CAP-Gly_domain IPR000938 0.04


Protein complexes (CORUM database) featuring TBCB

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring TBCB

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members Pathway Pathway_11 REACTOME_METABOLISM_OF_PROTEINS 0 12.01
Category members GO Category GO:0044267 cellular protein metabolic process Database 10.42
Category members GO Category GO:0015630 microtubule cytoskeleton Database 1.34
Category members GO Category GO:0005874 microtubule Database 1.21
Category members Pathway Pathway_742 REACTOME_PROTEIN_FOLDING 0 0.9
Category members GO Category GO:0051084 'de novo' posttranslational protein folding Database 0.63
Category members Pathway Pathway_1295 REACTOME_POST_CHAPERONIN_TUBULIN_FOLDING_PATHWAY 0 0.07
Category members GO Category GO:0030154 cell differentiation Database 0.06
Category members GO Category GO:0007399 nervous system development Database 0


© Copyright Svejstrup Laboratory 2015