bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: SYNJ2BP

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SYNJ2BP 0 1.589 0.807 0.782

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence

Background Information for SYNJ2BP:


Pubmed-SYNJ2BP »
Uniprot-SYNJ2BP »
Biogrid-SYNJ2BP »
ProteomicsDB-SYNJ2BP »

Tumorportal-SYNJ2BP »
COSMIC-SYNJ2BP »
GenomeRNAi-SYNJ2BP »
Genecards-SYNJ2BP


Protein-protein Interactions for SYNJ2BP
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait AKAP14 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in SYNJ2BP
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members PDZ IPR001478 0.15


Protein complexes (CORUM database) featuring SYNJ2BP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SYNJ2BP
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005739 mitochondrion Database 1.67
Category members GO Category GO:0008022 protein C-terminus binding Database 1.43
Category members GO Category GO:0031307 integral to mitochondrial outer membrane Database 0.24
Category members GO Category GO:0009986 cell surface Database 0.17
Category members GO Category GO:0048312 intracellular distribution of mitochondria Database 0.04
Category members GO Category GO:0002092 positive regulation of receptor internalization Database 0
Category members GO Category GO:0032926 negative regulation of activin receptor signaling pathway Database 0
Category members GO Category GO:0032927 positive regulation of activin receptor signaling pathway Database 0
Category members GO Category GO:0070699 type II activin receptor binding Database 0


.

© Copyright Svejstrup Laboratory 2015