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Query: SYNE3

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
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[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
SYNE3 1 0.098 2.980 -1.090

PTM Sites:

Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
SYNE3 Ubiquitylation K198 0.098 _MK(gl)AEYDAVK_

Background Information for SYNE3:





Protein-protein Interactions for SYNE3

Show screen data for Category Name and Description Link to cat description Data Source


Protein Domains in SYNE3

Domain name Domain Description TC-NER relevance -log10(p-value)
Category members Spectrin_repeat IPR002017 2.4
Category members Spectrin/alpha-actinin IPR018159 1.6
Category members KASH IPR012315 0.52
Category members Retrov_capsid_C IPR008916 0.13


Protein complexes (CORUM database) featuring SYNE3

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring SYNE3

Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0016021 integral to membrane Database 7.67
Category members GO Category GO:0005635 nuclear envelope Database 7.22
Category members GO Category GO:0003779 actin binding Database 5.41
Category members GO Category GO:0034993 SUN-KASH complex Database 0.28
Category members GO Category GO:0005640 nuclear outer membrane Database 0.18
Category members GO Category GO:0007010 cytoskeleton organization Database 0
Category members GO Category GO:0008360 regulation of cell shape Database 0


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