bioLOGIC Data » bioLOGIC CategoryView » bioLOGIC VennView » Experimental Details »

bioLOGIC Data

bioLOGIC Data


Exact search


Query: STRN4

RNAi screen result RNAPII IP (PI) CSB IP CSB IP (PI) Chrom. Chrom. (PI) Phosphorylation Ubiquitylation
W
[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:

 Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen
Gene name Point score Z-score sums RNAi high RNAi low RNAPII-IP (PI) CSB-IP CSB-IP (PI) Chrom. Chrom. (PI)
STRN4 1 1.246 0.010 -0.710 1.728 0.283 -0.698

PTM Sites:

 Back to Protein Results | Red/green: hit at lower/upper end of the respective screen
Gene name PTM type PTM site UV UV (PI) Sequence
STRN4 Phosphorylation S276 -0.067 _LGGSVLGQIPFLQNCEDEDS(ph)DEDDELDSVQHK_

Background Information for STRN4:


Pubmed-STRN4 »
Uniprot-STRN4 »
Biogrid-STRN4 »
ProteomicsDB-STRN4 »

Tumorportal-STRN4 »
COSMIC-STRN4 »
GenomeRNAi-STRN4 »
Genecards-STRN4


Protein-protein Interactions for STRN4
Show screen data for Category Name and Description Link to cat description Data Source
Category members IP bait DYNLL1 Cat. description Hein, Mann, Cell 2015
Category members IP bait FAM40A Cat. description Hein, Mann, Cell 2015
Category members IP bait FGFR1OP2 Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP2CA Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP2CB Cat. description Hein, Mann, Cell 2015
Category members IP bait PPP2R1A Cat. description Hein, Mann, Cell 2015
Category members IP bait SIKE1 Cat. description Hein, Mann, Cell 2015
Category members IP bait STRN Cat. description Hein, Mann, Cell 2015
Category members IP bait STRN3 Cat. description Hein, Mann, Cell 2015
Category members IP bait NHSL2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait NR1H3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PDCD10 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PLP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PPP2CB Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait PRDM14 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SIP1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SNAP29 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait SPINK2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TNFRSF1A Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TPTE2 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait TRAF3IP3 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait YPEL1 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF211 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF223 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF264 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF331 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF444 Cat. description BioPlex, Huttlin, Gygi, Cell 2015
Category members IP bait ZNF550 Cat. description BioPlex, Huttlin, Gygi, Cell 2015


Protein Domains in STRN4
Domain name Domain Description TC-NER relevance -log10(p-value)
Category members WD40_repeat_dom IPR017986 1.39
Category members WD40_repeat IPR001680 0.52
Category members G-protein_beta_WD-40_rep IPR020472 0.12
Category members Striatin_N IPR013258 0


Protein complexes (CORUM database) featuring STRN4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)


Categories featuring STRN4
Category Type Category ID Category Name Data Source TC-NER relevance -log10(p-value)
Category members GO Category GO:0005515 protein binding Database INF
Category members GO Category GO:0005737 cytoplasm Database 12.81
Category members GO Category GO:0043234 protein complex Database 2.73
Category members GO Category GO:0019904 protein domain specific binding Database 1.85
Category members GO Category GO:0043197 dendritic spine Database 0.86
Category members GO Category GO:0005516 calmodulin binding Database 0.74
Category members GO Category GO:0016020 membrane Database 0.52
Category members GO Category GO:0032403 protein complex binding Database 0.49
Category members GO Category GO:0000159 protein phosphatase type 2A complex Database 0
Category members GO Category GO:0008150 biological_process Database 0
Category members GO Category GO:0051721 protein phosphatase 2A binding Database 0
Category members GO Category GO:0070016 armadillo repeat domain binding Database 0


.

© Copyright Svejstrup Laboratory 2015