bioLOGIC-db

bioLOGIC Data

Query: SSR2

[Click on the plots to view the data selection in the respective scatterplot]

Protein Results:
Results for post-translational modifications: see below | Red/green: hit at lower/upper end of the respective screen

Gene name	Point score	Z-score sums	RNAi high	RNAi low	RNAPII-IP (PI)	CSB-IP	CSB-IP (PI)	Chrom.	Chrom. (PI)
SSR2	0	2.047	-0.130	1.100

PTM Sites:
Back to Protein Results | Red/green: hit at lower/upper end of the respective screen

Gene name	PTM type	PTM site	UV	UV (PI)	Sequence
SSR2	Ubiquitylation	K46		0.947	_LLASK(gl)SLLNR_

Pubmed-SSR2 »

ProteomicsDB-SSR2 »

COSMIC-SSR2 »

Genecards-SSR2

Protein-protein Interactions for SSR2

Show screen data for	Category Name and Description	Link to cat description	Data Source

Protein Domains in SSR2

	Domain name	Domain Description	TC-NER relevance -log10(p-value)

Protein complexes (CORUM database) featuring SSR2

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)

Categories featuring SSR2

	Category Type	Category ID	Category Name	Data Source	TC-NER relevance -log10(p-value)
Category members	Pathway	Pathway_456	REACTOME_TRANSLATION	0	INF
Category members	Pathway	Pathway_459	REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE	0	INF
Category members	GO Category	GO:0006412	translation	Database	INF
Category members	GO Category	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	Database	INF
Category members	GO Category	GO:0010467	gene expression	Database	INF
Category members	Pathway	Pathway_11	REACTOME_METABOLISM_OF_PROTEINS	0	12.01
Category members	GO Category	GO:0044267	cellular protein metabolic process	Database	10.42
Category members	GO Category	GO:0016021	integral to membrane	Database	7.67
Category members	GO Category	GO:0005789	endoplasmic reticulum membrane	Database	1.57
Category members	GO Category	GO:0005783	endoplasmic reticulum	Database	0.62
Category members	GO Category	GO:0006613	cotranslational protein targeting to membrane	Database	0.31